The detailed information of tRNA gene sequence


Sequence ID>WENV181406870
Genome IDOGCG01002090
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1243
End posion on genome 1170
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gatcggtata
tRNA gene sequence 
GGGCCCGTAGTCTAGGTGGTTAGGACGCCGCCCTTACACGGCGGAGGTCGCCGGTTCGAG
CCCGGCCGGGCCCAtat
Downstream region at tRNA end position 
atctggttta
Secondary structure (Cloverleaf model)
>WENV181406870	Val	TAC
                   a      Atat atctggttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C G
                    T     C G G C C     A
      G G A        A      | | | | |     G
    T       T C T G       G C C G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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