The detailed information of tRNA gene sequence


Sequence ID>WENV181406897
Genome IDOGCG01002335
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1620
End posion on genome 1696
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cagaagccac
tRNA gene sequence 
AGCGGGGTAGGGTAGCCTGGTAGCCTGCGGGGCTCATAACCCCGAGGTCCCCGGTTCGAA
TCCGGGCCCCGCTACCA
Downstream region at tRNA end position 
agaactttgt
Secondary structure (Cloverleaf model)
>WENV181406897	fMet	CAT
                   c      ACCA agaactttgt
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     G
    C       T G G G       C C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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