The detailed information of tRNA gene sequence


Sequence ID>WENV181407034
Genome IDOGCG01004613
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 4263
End posion on genome 4339
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
taatatataT
tRNA gene sequence 
AGCGGGGTAGGGCAGCTAGGAGTGCCCGGGGGGCTCATAACCCCCAGGTCGGAGGTTCAA
ATCCTCCCCCCGCTAGtt
Downstream region at tRNA end position 
tattttaaaa
Secondary structure (Cloverleaf model)
>WENV181407034	fMet	CAT
                   T      AGtt tattttaaaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
    T C G A        A      | | | | |     A
  A         C G G G       G G A G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     AGGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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