The detailed information of tRNA gene sequence


Sequence ID>WENV181407124
Genome IDOGCG01006934
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 936
End posion on genome 860
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agcccgtcgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCAAG
TCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
aatttaccga
Secondary structure (Cloverleaf model)
>WENV181407124	Asp	GTC
                   c      GCCA aatttaccga
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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