The detailed information of tRNA gene sequence


Sequence ID>WENV181407174
Genome IDOGCG01008711
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 158
End posion on genome 81
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttagagcggc
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTTAGAGCGGCGGGCTCCAGACCCGTAGGTCGGGGGTTCGA
GTCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
cagaggcctt
Secondary structure (Cloverleaf model)
>WENV181407174	Trp	CCA
                   c      ACCA cagaggcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C C C     A
    C C G A        A      | + | | |     G
  A         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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