The detailed information of tRNA gene sequence


Sequence ID>WENV181407365
Genome IDOGCG01019963
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1193
End posion on genome 1266
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aacaaaatga
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGAAGAGTGCTCGGTTTGCACCCGAGAGGTCCCGGGTTCAAA
TCCCGGCCGGTCCAttt
Downstream region at tRNA end position 
cgagaatgat
Secondary structure (Cloverleaf model)
>WENV181407365	Ala	TGC
                   a      Attt cgagaatgat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | +                 T T
    G       G A G T
      G A A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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