The detailed information of tRNA gene sequence


Sequence ID>WENV181407405
Genome IDOGCG01023542
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 1099
End posion on genome 1175
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggggcggcgt
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTGTTCGGGACGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
ttcccctccc
Secondary structure (Cloverleaf model)
>WENV181407405	Pro	CGG
                   t      ACCA ttcccctccc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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