The detailed information of tRNA gene sequence


Sequence ID>WENV181407433
Genome IDOGCG01026535
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 162
End posion on genome 247
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gatttaataT
tRNA gene sequence 
GCCGCGGTGCCCGAGTGGCCCAAGGGGATGGATTGCTAATCCATTCCCCGAAAGGGGGCG
TGGGTTCAAATCCCACCCGCGGCGTtt
Downstream region at tRNA end position 
ataaatagat
Secondary structure (Cloverleaf model)
>WENV181407433	Ser	GCT
                   T      GTtt ataaatagat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      C C A        G     TCCCCGAAAGGGGGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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