The detailed information of tRNA gene sequence


Sequence ID>WENV181407627
Genome IDOGCG01056217
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 319
End posion on genome 394
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgcgatgcac
tRNA gene sequence 
AGGCCAGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttcgtgtac
Secondary structure (Cloverleaf model)
>WENV181407627	Trp	CCA
                   c      GCCA cttcgtgtac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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