The detailed information of tRNA gene sequence


Sequence ID>WENV181407636
Genome IDOGCG01058838
Search identical group
Phylum/Class[OGCG] hot springs metagenome; Joseph's Coat, Yellowstone National Park, Washington, USA
Species
Start position on genome 44
End posion on genome 120
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gacccaatct
tRNA gene sequence 
GGAGCGGTAGTTCAGTCGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
acattcctgc
Secondary structure (Cloverleaf model)
>WENV181407636	Asp	GTC
                   t      GCCA acattcctgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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