The detailed information of tRNA gene sequence


Sequence ID>W141139635
Genome IDAWNW01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Hydrogenedens terephthalicus terephthalicus JGI OTU-1 [AWNW]
Start position on genome 88258
End posion on genome 88184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tattccccat
tRNA gene sequence
GGCGGCGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCCGGGGTTCGAA
TCCCTGCGCCGCCACtt
Downstream region at tRNA end position
tctatttatg
Secondary structure (Cloverleaf model)
>W141139635	Met	CAT
                   t      ACtt tctatttatg
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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