The detailed information of tRNA gene sequence


Sequence ID>W141139651
Genome IDAWNW01000008
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Hydrogenedens terephthalicus terephthalicus JGI OTU-1 [AWNW]
Start position on genome 70345
End posion on genome 70259
Amino Acid Leu
Anticodon AAG
Upstream region at tRNA start position 
aacagtattc
tRNA gene sequence 
GCCCGGGTGGCGGAAATGGCAGACGCGCCAGACTAAGGATCTGGTCCCAGAAATGGGGTA
GGAGTTCAATTCTCCTCCCGGGCACCA
Downstream region at tRNA end position 
ctaaacaatg
Secondary structure (Cloverleaf model)
>W141139651	Leu	AAG
                   c      ACCA ctaaacaatg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T C C T C     A
      A A A        G      | | | | |     A
    T       G G C G       A G G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TCCCAGAAATGGGGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    A A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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