The detailed information of tRNA gene sequence


Sequence ID>W141147008
Genome IDAWWJ01000056
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas chlororaphis YL-1 [AWWJ]
Start position on genome 153847
End posion on genome 153760
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caacaaaaac
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGACTGTAACAGGTCC
ATGAGTTCGAATCCCATCGCCTCCGCCA
Downstream region at tRNA end position 
tattcgtcac
Secondary structure (Cloverleaf model)
>W141147008	Ser	TGA
                   c      GCCA tattcgtcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | |   |     G
    G       G C C G       A T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACTGTAACAGGTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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