The detailed information of tRNA gene sequence


Sequence ID>W08002397
Genome IDABEX01000004
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens CM4 [ABEX]
Start position on genome 67366
End posion on genome 67277
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagcgcagt
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCACTCGTTTGCTAAATGAGCATACCCCTAATAAGG
GTATCGAGGGTTCGAATCCCTCCGTCTCCGcca
Downstream region at tRNA end position 
cctgctttgc
Secondary structure (Cloverleaf model)
>W08002397	Ser	GCT
                   t      Gcca cctgctttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACCCCTAATAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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