The detailed information of tRNA gene sequence


Sequence ID>W141169957
Genome IDAXWU01000015
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio islandicus DSM 12570 [AXWU]
Start position on genome 126242
End posion on genome 126145
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
attctatatc
tRNA gene sequence 
GGGAGTGTATGGGGTTCTGGTGTCCCTCCTGGACTTCAAATCCAGTGTTGCCTGTGAGGA
ACAGGCAGGGTGGGTTCGATTCCCACACGCTCCCGCCA
Downstream region at tRNA end position 
actctttaaa
Secondary structure (Cloverleaf model)
>W141169957	SeC(p)	TCA
                   c      GCCA actctttaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T T
                    A     C A C C C     A
      C T T        T      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | +                 T T
    G       C C C T
      T G T        C     TGTTGCCTGTGAGGAACAGGCAGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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