The detailed information of tRNA gene sequence


Sequence ID>WENV181803945
Genome IDOGSE01000029
Search identical group
Phylum/Class[OGSE] human gut metagenome; fecal sample 3 from infant 2
Species
Start position on genome 73301
End posion on genome 73397
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaagtattt
tRNA gene sequence 
GGGAATTGATGGGTGCTGGTGTGCCCTGCGGTCTTCAAAACCGTCTCAGGTAGTTAAGAG
CTGCCCGGGTAGGTTCGATTCCTACCATTTCCCGCCA
Downstream region at tRNA end position 
tacatatata
Secondary structure (Cloverleaf model)
>WENV181803945	SeC	TCA
                   t      GCCA tacatatata
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T   T
                     T - A
                     G - C          T T
                    A     C A T C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T A G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     CTCAGGTAGTTAAGAGCTGCCCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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