The detailed information of tRNA gene sequence


Sequence ID>WENV181837590
Genome IDOGVL01000027
Search identical group
Phylum/Class[OGVL] freshwater metagenome; freshwater
Species
Start position on genome 2371
End posion on genome 2282
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacccaaaaa
tRNA gene sequence 
GGAAGATTGGCTGAGTTGGCCTAAAGCGGCACCCTGCTAAGGTGTTAATCGGTAAAACCG
GTTCATTGGTTCGAATCCAATATCTTCCGCaa
Downstream region at tRNA end position 
aatttagaaa
Secondary structure (Cloverleaf model)
>WENV181837590	Ser	GCT
                   a      GCaa aatttagaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     T A A C C     A
    T T G A        G      | | | | |     G
  G         G T C G       A T T G G     C
  G           | | |                 T T
  C         A A G C
    C T A          G     TAATCGGTAAAACCGGTTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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