The detailed information of tRNA gene sequence


Sequence ID>WENV181837687
Genome IDOGVL01000993
Search identical group
Phylum/Class[OGVL] freshwater metagenome; freshwater
Species
Start position on genome 1457
End posion on genome 1530
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttgtgacggt
tRNA gene sequence 
TTCCCACTGGTGTAAGGGTAGCATTACAGCCTCCAAATCTGTCGGTCGCAGTTCGAATCT
GTGGTGGGAAGCCA
Downstream region at tRNA end position 
ttttagtttt
Secondary structure (Cloverleaf model)
>WENV181837687	Trp	CCA
                   t      GCCA ttttagtttt
                     T - A
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G          T A
                    T     G T G T C     A
        A A        G      | + | | |     G
      G     T G T G       C G C A G     C
      G     + | | +                 T T
      G     G C A T
        T A        T     CGGT
                    A - T
                    C - G
                    A - T
                    G - C
                    C   T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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