The detailed information of tRNA gene sequence


Sequence ID>WENV181840407
Genome IDOGVP01000418
Search identical group
Phylum/Class[OGVP] freshwater metagenome; freshwater
Species
Start position on genome 4298
End posion on genome 4386
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attaaaaatC
tRNA gene sequence 
GGACGGGTGGCAGAGCGGTTTAATGTACCTGACTCGAAATCAGGAGTAGGGGCAACCCTA
CCGTGGGTTCAAATCCCACCCCGTCCGAgt
Downstream region at tRNA end position 
cggcgaggac
Secondary structure (Cloverleaf model)
>WENV181840407	Ser	CGA
                   C      GAgt cggcgaggac
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       G T G G G     C
    G         | | +                 T T
    T       A T G T
      T T A        A     AGTAGGGGCAACCCTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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