The detailed information of tRNA gene sequence


Sequence ID>WENV181842319
Genome IDOGVT01000573
Search identical group
Phylum/Class[OGVT] freshwater metagenome; freshwater
Species
Start position on genome 3233
End posion on genome 3307
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaagaacaaa
tRNA gene sequence 
GCCCTGATAGCTTAAAGGCAAAGCAGTCGACTCATAATCGATCGAGTCCAGGTTCGAGTC
CTGGTCAGGGCACCA
Downstream region at tRNA end position 
aacaccactt
Secondary structure (Cloverleaf model)
>WENV181842319	Ile2	CAT
                   a      ACCA aacaccactt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T          T G
                    T     G G T C C     A
        A A        A      | | | | |     G
      A     T T C G       C C A G G     C
      G     | | | |                 T T
      G     A A G C
        C A        A     CGAGT
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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