The detailed information of tRNA gene sequence


Sequence ID>WENV181842679
Genome IDOGVT01010775
Search identical group
Phylum/Class[OGVT] freshwater metagenome; freshwater
Species
Start position on genome 246
End posion on genome 170
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tatataaaat
tRNA gene sequence 
TGTGGGATAGAGCAGTTGGCCAGCTCGTTAGGCTCATAACCTAAAGGTCATCGGTTCGAA
TCCGATCCCCGCAACCA
Downstream region at tRNA end position 
gttttaccag
Secondary structure (Cloverleaf model)
>WENV181842679	fMet	CAT
                   t      ACCA gttttaccag
                     T - A
                     G - C
                     T + G
                     G - C
                     G - C
                     G - C
                     A   C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C G A G       A T C G G     C
    G       | | | |                 T T
    G       G C T C
      C C A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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