The detailed information of tRNA gene sequence


Sequence ID>WENV181842932
Genome IDOGVT01042614
Search identical group
Phylum/Class[OGVT] freshwater metagenome; freshwater
Species
Start position on genome 285
End posion on genome 381
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
agtttcacat
tRNA gene sequence 
GGAAGAGGTTCGCTCCCCGGCGGGACGTCCGGACTTCAAATCCGGGAAGGGCTGTCGTAC
AGTCCTTGGTGGGTTCGACTCCCATACTCTTCCGCCA
Downstream region at tRNA end position 
tatcactata
Secondary structure (Cloverleaf model)
>WENV181842932	SeC	TCA
                   t      GCCA tatcactata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     G   A          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    C       T C G C       G T G G G     C
    G       +   | |                 T T
    G       G A C G
      C G G        T     GAAGGGCTGTCGTACAGTCCTTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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