The detailed information of tRNA gene sequence


Sequence ID>WENV181854292
Genome IDOGWK01000021
Search identical group
Phylum/Class[OGWK] freshwater metagenome; freshwater
Species
Start position on genome 10065
End posion on genome 9975
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaacattaa
tRNA gene sequence 
GGAAGTGTGGCAGAGAGGATTATCGCAGAATCCTGCTAAGATTCCGTGTCAAGTAATTGG
CACCGTTGGTTCGAATCCAACCACTTCCGCCt
Downstream region at tRNA end position 
tggcagtata
Secondary structure (Cloverleaf model)
>WENV181854292	Ser	GCT
                   a      GCCt tggcagtata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C A A C C     A
      A G A        G      | | | | |     G
    G       G A C G       G T T G G     C
    G       +   | |                 T T
    A       T C G C
      T T A        A     CGTGTCAAGTAATTGGCACC
                    G - C
                    A - T
                    A - T
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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