The detailed information of tRNA gene sequence


Sequence ID>W141231120
Genome IDBATP01000006
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesHaloferula sp. BvORR071 [BATP]
Start position on genome 44574
End posion on genome 44484
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagttccga
tRNA gene sequence 
GGATCGGTGGCTGAGTGGTCGAAAGCACACCTTTGCTAAAGGTGCGTACCTCACAAGGGT
ACCGAGGGTTCGAATCCCTCCCGGTCCGCCA
Downstream region at tRNA end position 
gcgtgtttca
Secondary structure (Cloverleaf model)
>W141231120	Ser	GCT
                   a      GCCA gcgtgtttca
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACCTCACAAGGGTACC
                    C - G
                    A - T
                    C - G
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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