The detailed information of tRNA gene sequence


Sequence ID>C08010600
Genome IDCP000821
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella sediminis HAW-EB3 [CP000821]
Start position on genome 2993300
End posion on genome 2993213
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtctcgttc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCACCGGTCTTGAAAACCGGCATGGGTTTGTAGCCC
ATCTAGGGTTCAAATCCCTATCTCTCCGcca
Downstream region at tRNA end position 
tattaaaatc
Secondary structure (Cloverleaf model)
>C08010600	Ser	TGA
                   c      Gcca tattaaaatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G A C G       T A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CATGGGTTTGTAGCCCATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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