The detailed information of tRNA gene sequence


Sequence ID>WENV182594502
Genome IDOJIV01022851
Search identical group
Phylum/Class[OJIV] seawater metagenome; Sea water
Species
Start position on genome 488
End posion on genome 394
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atgtactcaa
tRNA gene sequence 
GGAAGAATCACGTCCGTGGTCGGGCGCCCGGTCTTCAAAACCGGTGAGGGGCGTTAGACG
TGCCTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
attttccgtg
Secondary structure (Cloverleaf model)
>WENV182594502	SeC	TCA
                   a      GCCA attttccgtg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     A   C
                     T   C          T C
                    C     C A C C C     A
      T G C        A      | | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      C G          C     TGAGGGGCGTTAGACGTGCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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