The detailed information of tRNA gene sequence


Sequence ID>C08009903
Genome IDCP000931
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella halifaxensis HAW-EB4 [CP000931]
Start position on genome 2702926
End posion on genome 2702840
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atattgcatc
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTAATCCCTA
ACGAGAGTTCGAATCTCTCGCTCACCGcca
Downstream region at tRNA end position 
tattagaaga
Secondary structure (Cloverleaf model)
>C08009903	Ser	GGA
                   c      Gcca tattagaaga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTAATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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