The detailed information of tRNA gene sequence


Sequence ID>WENV183062271
Genome IDOLID01001389
Search identical group
Phylum/Class[OLID] seawater metagenome; Sea water
Species
Start position on genome 4343
End posion on genome 4249
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgcagatcat
tRNA gene sequence 
GGAAGGACATCGTCCCCGGTGGGGCGCCCGGACTTCAACTCCGGTGAGATGCGCAACGCG
CGTCTGGTGGGTTCGACTCCCATGTCCTTCCGCCA
Downstream region at tRNA end position 
ctttcatgcc
Secondary structure (Cloverleaf model)
>WENV183062271	SeC	TCA
                   t      GCCA ctttcatgcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          C     TGAGATGCGCAACGCGCGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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