The detailed information of tRNA gene sequence


Sequence ID>C08011192
Genome IDCP001139
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri MJ11 [CP001133, CP001139]
Start position on genome 2837496
End posion on genome 2837423
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaaaacaagt
tRNA gene sequence 
CGGTGAATAGCGCAGCTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCGAA
TCCCTCTTCACCGAcca
Downstream region at tRNA end position 
ctatttcatt
Secondary structure (Cloverleaf model)
>C08011192	Pro	TGG
                   t      Acca ctatttcatt
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C G C G       G G G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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