The detailed information of tRNA gene sequence


Sequence ID>C08011189
Genome IDCP001139
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesAliivibrio fischeri MJ11 [CP001133, CP001139]
Start position on genome 2848732
End posion on genome 2848659
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
taaaaatatt
tRNA gene sequence 
GCTGATATAGCTCAGCCCGGTAGAGCGCACCCTTGGTAAGGGTGAGGTCCCCAGTTCAAG
TCTGGGTATCAGCAcca
Downstream region at tRNA end position 
tttactgaca
Secondary structure (Cloverleaf model)
>C08011189	Thr	GGT
                   t      Acca tttactgaca
                     G - C
                     C - G
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     G G G T C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C A G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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