The detailed information of tRNA gene sequence


Sequence ID>C08000429
Genome IDCP001132
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 53993 [CP001132]
Start position on genome 1686344
End posion on genome 1686257
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccacctccgc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGCCATAACGGCGCCGACTCGAAATCGGATGGGGGGTAAAACCC
CACGTGGGTTCGAATCCCACCCTCTCCGcca
Downstream region at tRNA end position 
tattaaatag
Secondary structure (Cloverleaf model)
>C08000429	Ser	CGA
                   c      Gcca tattaaatag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  C           | | |                 T T
  C         A C G G
    A T A          C     TGGGGGGTAAAACCCCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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