The detailed information of tRNA gene sequence


Sequence ID>WENV183512160
Genome IDOMKS01000082
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 75272
End posion on genome 75176
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttgactatc
tRNA gene sequence 
GGAGGTGACAGGCAACCGGTGTTGCTCCTGGTCTTCAAAACCAGCGTGGGGCGGCGATCC
CGTCCCGGGTGGGTTCGACTCCCATTCGCCTCCGCCA
Downstream region at tRNA end position 
tttttttgtt
Secondary structure (Cloverleaf model)
>WENV183512160	SeC	TCA
                   c      GCCA tttttttgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T          T C
                    C     T A C C C     A
      C C A        A      + | | | |     G
    G       A C G G       G T G G G     C
    G       | | | +                 T T
    T       T G C T
      G T          C     CGTGGGGCGGCGATCCCGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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