The detailed information of tRNA gene sequence


Sequence ID>WENV183512563
Genome IDOMKS01000754
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 26165
End posion on genome 26069
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggactcaggt
tRNA gene sequence 
GGAAGCGGATGGGTCCTGGTGGGTCCCCCGGACTTCAAATCCGGTGTCGGGTGCGACGAG
CGCCCTGGGCAGGTTCGATTCCTGTGCGCTTCCGCCA
Downstream region at tRNA end position 
cagtgatttc
Secondary structure (Cloverleaf model)
>WENV183512563	SeC	TCA
                   t      GCCA cagtgatttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T T
                    A     T G T C C     A
      T C C        T      + | | | |     G
    G       T G G G       G C A G G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGTCGGGTGCGACGAGCGCCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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