The detailed information of tRNA gene sequence


Sequence ID>WENV183513505
Genome IDOMKS01005544
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 2269
End posion on genome 2186
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagctcttac
tRNA gene sequence 
GGAGGTGTGGCGTAATGGTAGCGCAGCACTCTCGAAAAGTGTCCGCCTTTCGGGGCGTGT
GAGTTCGATTCTCACCACCTCCGCtg
Downstream region at tRNA end position 
ttgtttaaat
Secondary structure (Cloverleaf model)
>WENV183513505	Ser	CGA
                   c      GCtg ttgtttaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     C A C T C     A
        A A        G      | | | | |     G
      T     T G C G       G T G A G     C
      G     + | | |                 T T
      G     G C G C
        T A        A     CCGCCTTTCGGGGCGT
                    G + T
                    C - G
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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