The detailed information of tRNA gene sequence


Sequence ID>WENV183514584
Genome IDOMKS01023880
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 1760
End posion on genome 1856
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tatctccagt
tRNA gene sequence 
GGAAGCGGACGGGTCCTGGTGGGTCCCCCGGACTTCAAATCCGGTGTGCTGCGCGACGAG
CGTGGCTGGTGAGTTCGATTCTCATCCGCTTCCGCCA
Downstream region at tRNA end position 
gctgtttact
Secondary structure (Cloverleaf model)
>WENV183514584	SeC	TCA
                   t      GCCA gctgtttact
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    A     T A C T C     A
      T C C        C      + | | | |     G
    G       T G G G       G T G A G     C
    G       + + | |                 T T
    T       G T C C
      G G          C     TGTGCTGCGCGACGAGCGTGGCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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