The detailed information of tRNA gene sequence


Sequence ID>WENV183514587
Genome IDOMKS01024106
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 983
End posion on genome 1067
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aattttttta
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTCGATCGGGGCGGTCTCGAAAACCGTTGTCCCTTCGGGGACC
CAGGGTTCGAATCCCTGCCTCTCCGaaa
Downstream region at tRNA end position 
gcgtttcaag
Secondary structure (Cloverleaf model)
>WENV183514587	Ser	CGA
                   a      Gaaa gcgtttcaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGTCCCTTCGGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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