The detailed information of tRNA gene sequence


Sequence ID>WENV183515165
Genome IDOMKS01048755
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 1593
End posion on genome 1505
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attcaaaatc
tRNA gene sequence 
GGAAGGATGCCGGAGTGGTTGAACGGGGCGGTCTCGAAAACCGTTGATCTCTTTTAGGGA
TCCGAGAGTTCGAATCTCTCTCCTTCCGCtc
Downstream region at tRNA end position 
atagagggaa
Secondary structure (Cloverleaf model)
>WENV183515165	Ser	CGA
                   c      GCtc atagagggaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G A G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGATCTCTTTTAGGGATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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