The detailed information of tRNA gene sequence


Sequence ID>WENV183515200
Genome IDOMKS01050538
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 1375
End posion on genome 1289
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgctggtgct
tRNA gene sequence 
GCCGGGGTCGCTTAGCCTGGAAGAGCGCCAGCCTGGAAAGCTGGTGTCCGCAAGGACTCA
AGGGTTCAAATCCCTTTCCCGGCGCCA
Downstream region at tRNA end position 
cctaaaaacc
Secondary structure (Cloverleaf model)
>WENV183515200	Ser	GGA
                   t      GCCA cctaaaaacc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    C       T T C G       A A G G G     C
    T       + | | |                 T T
    G       G A G C
      G A A        G     TGTCCGCAAGGACTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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