The detailed information of tRNA gene sequence


Sequence ID>WENV183515262
Genome IDOMKS01054131
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 1444
End posion on genome 1369
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aaataatttt
tRNA gene sequence 
GGGCCCGTAGTTCACCCGGTAGAACGCCTGCTTTGCAAGCAGGAGGTAAGCGGTTCGAGT
CCGCTCGGGTCCACCA
Downstream region at tRNA end position 
aagtttattt
Secondary structure (Cloverleaf model)
>WENV183515262	Ala	TGC
                   t      ACCA aagtttattt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C G C C     A
      C C A        A      | | | | |     G
    C       C T T G       A G C G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     AGGTA
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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