The detailed information of tRNA gene sequence


Sequence ID>WENV183515431
Genome IDOMKS01063636
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 1009
End posion on genome 913
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aactttatct
tRNA gene sequence 
GGGAATGCAAGGGCGCCTGGTGGCCTCCGCGGACTTCAAATCCGTTGTGTCCCGACCACA
GTCGGGATAGGTGGGTTCGATTCCCACACGTTCCCGCaa
Downstream region at tRNA end position 
atttgataat
Secondary structure (Cloverleaf model)
>WENV183515431	SeC	TCA
                   t      GCaa atttgataat
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      C C G        A      | | | | |     G
    T       C G G G       G T G G G     C
    G         | + |                 T T
    G       C C T C
      T G G        C     TGTGTCCCGACCACAGTCGGGATAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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