The detailed information of tRNA gene sequence


Sequence ID>WENV183515470
Genome IDOMKS01066187
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 241
End posion on genome 334
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actgtttcaa
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGCTTAGTGCGGCCGCCTGCTAAGCGGCTTGGGGGTCAAAAGC
CCCCTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atttagttgg
Secondary structure (Cloverleaf model)
>WENV183515470	Ser	GCT
                   a      GCCA atttagttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G A G G G     C
  G         + | | |                 T T
  C         G T G C
    T T A          G     TTGGGGGTCAAAAGCCCCCTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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