The detailed information of tRNA gene sequence


Sequence ID>WENV183515764
Genome IDOMKS01091268
Search identical group
Phylum/Class[OMKS] sediment metagenome; hot spring sediment
Species
Start position on genome 517
End posion on genome 612
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacaaaaatt
tRNA gene sequence 
GGGAGTGGTTGAGTCCTGGTGGGTTCCCCGGTCTTCAAAACCGGTGGCGGGTCGCGTTGC
GAGCCGCGGTGGGTTCGACTCCCATCCACTCCCGCCt
Downstream region at tRNA end position 
tttaattaat
Secondary structure (Cloverleaf model)
>WENV183515764	SeC	TCA
                   t      GCCt tttaattaat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      T C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + + | |                 T T
    T       G T T C
      G G          C     TGGCGGGTCGCGTTGCGAGCCGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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