The detailed information of tRNA gene sequence


Sequence ID>ENV08000001
Genome IDABLU01008679
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 57
End posion on genome 133
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
taaaacaagc
tRNA gene sequence 
GGCGCTGTGGCCAAGTGGTTTAAGGCGAAGGTCTGCAAAACCTTTATTCGTCGGTTCGAA
TCCGACCGGCGCCTCAA
Downstream region at tRNA end position 
aaaaaannnn
Secondary structure (Cloverleaf model)
>ENV08000001	Cys	GCA
                   c      TCAA aaaaaannnn
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T + G
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       A C C G       G T C G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATTC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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