The detailed information of tRNA gene sequence


Sequence ID>ENV08000002
Genome IDABLU01009365
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 111
End posion on genome 19
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttccccgttt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGACCCCCTCCGCGGG
GGTCCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
atagccgatt
Secondary structure (Cloverleaf model)
>ENV08000002	Ser	CGA
                   t      GCCA atagccgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGACCCCCTCCGCGGGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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