The detailed information of tRNA gene sequence


Sequence ID>ENV08000006
Genome IDABLU01016968
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 11
End posion on genome 101
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttcccgttt
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGACCCCCTCGCGGGG
TCCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
atagccgatt
Secondary structure (Cloverleaf model)
>ENV08000006	Ser	CGA
                   t      GCCA atagccgatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGACCCCCTCGCGGGGTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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