The detailed information of tRNA gene sequence


Sequence ID>ENV08000010
Genome IDABLU01020860
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 127
End posion on genome 51
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
CGGGACGTAGCGCAGTCTGGTAGCGCACCTGAATGGGGTTCAGGGGGCCGGAGGTTCAAA
TCCTCTCGTCCCGACCA
Downstream region at tRNA end position 
attatttaag
Secondary structure (Cloverleaf model)
>ENV08000010	Pro	GGG
                   t      ACCA attatttaag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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