The detailed information of tRNA gene sequence


Sequence ID>ENV08000013
Genome IDABLU01030421
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 126
End posion on genome 34
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGGTTTATAGCC
CCTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
catcagaaaa
Secondary structure (Cloverleaf model)
>ENV08000013	Ser	GCT
                   n      GCCA catcagaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAGGGGTTTATAGCCCCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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