The detailed information of tRNA gene sequence


Sequence ID>ENV08000020
Genome IDABLU01034420
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 12
End posion on genome 101
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttcaaaaatc
tRNA gene sequence 
GGAGAGTTGGCAGAGCGGTTGAATGCGGCGGTCTTGAAAACCGTTAAGGATGCAAGTCCT
TCCGGGGTTCGAATCCCTGACTCTCCGCAA
Downstream region at tRNA end position 
ccggaaaaag
Secondary structure (Cloverleaf model)
>ENV08000020	Ser	TGA
                   c      GCAA ccggaaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TAAGGATGCAAGTCCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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