The detailed information of tRNA gene sequence


Sequence ID>ENV08000021
Genome IDABLU01034570
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 104
End posion on genome 14
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaaggaaac
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGCCTGGAAAGCGTGTGTACGGTAACCCCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gtttttgtgt
Secondary structure (Cloverleaf model)
>ENV08000021	Ser	GGA
                   c      GCCA gtttttgtgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGTACGGTAACCCCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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