The detailed information of tRNA gene sequence


Sequence ID>ENV08000028
Genome IDABLU01050262
Search identical group
Phylum/Classmicrobial fraction from oxidized sediments of the Soudan Mine (Minnesota)
Species
Start position on genome 37
End posion on genome 113
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caacttgaat
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGCTAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGAG
TCCAGGTAGGCCCACCA
Downstream region at tRNA end position 
caataaannn
Secondary structure (Cloverleaf model)
>ENV08000028	Met	CAT
                   t      ACCA caataaannn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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